| RefNo | Title | Date |
| EC/1840/11 | Jeffreys, John Gwyn: certificate of election to the Royal Society | |
| IM/Maull/002416 | Jeffreys, John Gwyn | nd |
| RR/7/452 | Referee's report by Albert Charles Gotthilf Lewis Gunther, on a paper 'Preliminary report of the biological results of a cruise in H. M. S. 'Valorous’ to Davis Strait in 1875' by John Gwyn Jeffreys | 4 August 1876 |
| RR/7/453 | Referee's report by Charles Thomas Wyville Thomson, on a paper 'Preliminary report of the biological results of a cruise in H. M. S. 'Valorous’ to Davis Strait in 1875' by John Gwyn Jeffreys | 10 August 1876 |
| MC/9/479 | Letter from J [John] Gwyn Jeffreys, 25 Devonshire Place, Portland Place, to Walter White, [Assistant Secretary of the Royal Society] | 23 January 1873 |
| MC/9/13 | Letter from J [John] Gwyn Jeffreys, 25 Devonshire Place, Portland Place, to Mr [George] Bentham | 22 January 1870 |
| MC/10/312 | Letter from J [John] Gwyn Jeffreys, 33 Grosvenor Street, to Dr [Joseph Dalton] Hooker, [President of the Royal Society] | 3 December 1875 |
| MC/9/414 | Letter from Wm H [William Healey] Dall, US Coast Survey, Office of the US Coast Survey, San Francisco, California, to J [John] Gwyn Jeffreys | 6 October 1872 |
| MC/9/429 | Letter from J [John] Gwyn Jeffreys, 25 Devonshire Place, Portland Place, to [William Sharpey and George Gabriel Stokes], Secretaries of the Royal Society | 6 November 1872 |
| MC/9 | Volume 9 of miscellaneous correspondence regarding business matters, sent to the Royal Society | 1870-June 1873 |
| MC/10/287 | Letter from John Gwyn Jeffreys, Ware Priory, Hertfordshire, to [Joseph Dalton Hooker], President of the Royal Society | 8 October 1875 |
| MC/10 | Volume 10 of miscellaneous correspondence regarding business matters, sent to the Royal Society | July 1873-1876 |
| MC/11/104 | Letter from J [John] Gwyn Jeffreys, Ware Priory, Hertfordshire, to the Secretary of the Admiralty | 6 October 1877 |
| MC/11/131 | Letter from J [John] Gwyn Jeffreys, Athenaeum Club, Pall Mall, to [Joseph Dalton] Hooker, [President of the Royal Society] | 7 December 1877 |
| MC/11/127 | Letter from J [John] Gwyn Jeffreys, Ware Priory, Hertfordshire, to [Joseph Dalton Hooker], President of the Royal Society | 1 December 1877 |
| AP/37/1 | Paper, 'Notes on British Foraminifera' by John Gwyn Jeffreys | 18 June 1855 |
| MC/11 | Volume 11 of miscellaneous correspondence regarding business matters, sent to the Royal Society | 1877-1879 |
| MS/257/2/345 | Letter from John Gwyn Jeffreys, Galway to Edward Sabine | 7 June 1869 |
| MC/17/353 | Letter from [Sir Charles Thomas] Wyville Thomson, to [John] Gwyn Jeffreys | c. March 1872 |
| RSC/5/2/9 | Letter from Geo [George] Henry Richards, 38 Old Broad St., to [John Gwyn] Jeffreys | 4 July 1879 |
| RSC/5/2/10 | Letter from Geo [George] Henry Richards, to [John Gwyn] Jeffreys | 16 July 1879 |
| RSC/5/2/28 | Letter from John Tyndall, Royal Institution of Great Britain, to [John] Gwyn Jeffreys | 31 May 1884 |
| RSC/5/2/6 | Letter from Erasmus Ommanney, United Services Club, Pall Mall, to [John] Gwyn Jeffreys | 19 November 1878 |
| RSC/5/2/1 | Letter from William Thomson, Yacht 'Lalla Rooke', Portsmouth, to Mr [John] Gwyn Jeffreys | 3 July 1878 |
| RSC/5/2/7 | Letter from Lord Salisbury, Foreign Office, to Mr [John] Gwyn Jeffreys | 21 January 1879 |
| RSC/5/2/3 | Letter from J W Cooper, War Office, to Mr [John] Gwyn Jeffreys | 18 July 1878 |
| RSC/5/2/19 | Letter from C W [Charles William] Siemens, 3 Palace Houses, Kensington Gardens, to Mr [John] Gwyn Jeffreys | 8 June 1881 |
| RSC/5/2/14 | Letter from Lord Salisbury, 20 Arlington St., to Mr [John Gwyn] Jeffreys | 9 June 1880 |
| RSC/5/2/16 | Letter from I [Isaac] Lowthian Bell, Aix les Bains, to J [John] Gwyn Jeffreys and G H [George Henry] Richards | 10 May 1881 |
| RSC/5/2/18 | Letter from Lord Rayleigh, 5 Salisbury Villas, Cambridge, to Mr [John] Gwyn Jeffreys | 6 June 1881 |
| RSC/5/2/20 | Letter from W H [William Henry] Smith, 3 Grosevenor Place, London, to J [John] Gwyn Jeffreys | 26 June 1881 |
| RSC/5/2/21 | Letter from I [Isaac] Lowthian Bell, Rounton Grange, Northallerton, to J [John] Gwyn Jeffreys | 5 July 1881 |
| RSC/5/2/15 | Letter from Geo [George] Henry Richards, Telegraph Construction & Maintenance Company Limited, Offices 38 Old Broad St., London, to [John Gwyn] Jeffreys | 28 January 1881 |
| RSC/5/2/17 | Letter from C [Charles] Wyville Thomson, Bonsyde, Linlithgow, to [John] Gwyn Jeffreys | 21 May 1881 |
| RSC/5/2/22 | Letter from W H [William Henry] Smith, House of Commons, to [John Gwyn] Jeffreys | 22 June 1882 |
| RSC/5/2/23 | Letter from W H [William Henry] Smith, House of Commons, to Mr [John Gwyn] Jeffreys | 4 July 1882 |
| RSC/5/2/24 | Letter from H E [Henry Enfield] Roscoe, The Owens College, Manchester, to J [John] Gwyn Jeffreys | 28 April 1883 |
| RSC/5/2/26 | Letter from T H [Thomas Henry] Huxley, 4 Marlborough Place, Abbey Road, to [John] Gwyn Jeffreys | 18 November 1883 |
| RSC/5/2/25 | Letter from I [Isaac] Lowthian Bell, Rounton Grange, Northallerton, to J [John] Gwyn Jeffreys and G H [George Henry] Richards | 4 June 1883 |
| RSC/5/2/27 | Letter from T H [Thomas Henry] Huxley, 4 Marlborough Place, Abbey Road, to [John] Gwyn Jeffreys | 9 December 1883 |
| RSC/5/2/29 | Letter from Geo [George] Busk, 32 Harley Street, to [John Gwyn] Jeffreys | 4 June 1884 |
| RSC/5/2/30 | Letter from J J [James Joseph] Sylvester, New College, Oxford, to [John Gwyn Jeffreys] | 5 June 1884 |
| RSC/5/2/31 | Letter from Alex W [Alexander William] Williamson, 28 Primrose Hill Road, to Dr [John] Gwyn Jeffreys | 8 June 1884 |
| RSC/5/2/8 | Letter from William Thomson, The University, Glasgow, to Dr [John] Gwyn Jeffreys | 31 March 1879 |
| RSC/5/2/2 | Letter from Lord Rosse, Birr Castle, Parsonstown, to 'My dear Sir' [John Gwyn Jeffreys] | 4 July 1878 |
| RSC/5/2/13 | Letter from C [Charles] Wyville Thomson, Bonsyde, Linlithgow, to [John] Gwyn Jeffreys | 3 May 1880 |
| RSC/5/2/12 | Letter from John Percy, House of Commons, to Mr [John] Gwyn Jeffreys | 22 February 1880 |
| RSC/5/2 | Correspondence of Treasurers of the Royal Society Club | 3 July 1878-27 June 1894 |
| RSC/5/2/5 | Letter from Erasmus Ommanney, United Services Club, Pall Mall, to [John] Gwyn Jeffreys | 3 November 1878 |
| PP/3/19 | Paper, 'Remarks on the soundings and temperatures obtained in the Faeroe [Faroe-Shetland] Channel during the summer of 1882' by T H Tizard | 1883 |